Research Interests


Research Experiences


Visiting Researcher (VR) Mar 2024 - Present
Okinawa Institute of Science and Technology Graduate University (OIST), Japan Affiliation
Research topic: Evolutionary dynamics of strongly conserved sequences in vertebrates and insects Code Repository
Supervisor: Professor Jonathan Miller (BS in Statistics, Yale; PhD in Biology, Cambridge; PhD in Physics, Caltech)  
■ Contributed to FY2023 Annual Report  


Lead Researcher Mar 2023 - Present
Advanced Machine Intelligence Research Lab (AMIRL), American International University-Bangladesh (AIUB), Bangladesh Portfolio
Roles: Research Assistant (Mar 2023 - Dec 2023), Researcher (Dec 2023 - Feb 2024), Lead Researcher (May 2024 - Present)  
Research Affiliations:  
Department of Natural Language Processing and Computational Linguistics  
Supervisor: Dr. Mohammad Firoz Mridha (Associate Professor, Department of Computer Science, AIUB)  
Collaborators: Prof. R. Simon Sherratt (IEEE Fellow), Prof. Nilanjan Dey, Prof. Jungpil Shin, Prof. Yuichi Okuyama, Prof. Zeyar Aung, Prof. Yutaka Watanobe, Prof. Md. Rashedul Islam  
■ Published articles in the fields of DL, QML, GNN, XAI, conformal prediction, human-in-the-loop, NLP, and operations research  



Visiting Research Student (VRS) Feb 2023 - Feb 2024
Okinawa Institute of Science and Technology Graduate University (OIST), Japan Affiliation
Research topic: Evolutionary dynamics of strongly conserved sequences in vertebrates and insects Code Repository
Supervisor: Professor Jonathan Miller (BS in Statistics, Yale; PhD in Biology, Cambridge; PhD in Physics, Caltech)  
Collaborators: Dr. Lucia Zifcakova, Dr. Priscila Do Nascimento Biller, Dr. Zdenek Lajbner, and Dr. Reuven Pnini  
■ Critically analyzed and visually represented all potential combinations of inter-gap segments (IGS), ancestral repeats (ARs), and contiguous mismatched ARs in human/mouse and human/gorilla genome alignments, focusing on both DNAs and repetitive sequences  
■ Successfully replicated the findings of the neutral indel model proposed by Lunter, Pointing, and Hein (2006)  


Research Lead May 2022 - Mar 2023
Research Camp 02, Scholarship School BD, Bangladesh  
Research topic: Ultrasound-Based AI for COVID-19 Detection  
Supervisor: Dr. Mohammad Arafat Hussain (Post-doctoral Research Fellow at Image, Informatics & Intelligence Research Lab, Harvard Medical School; PhD in Biomedical Eng., UBC Canada; MASc in Biomedical Eng., UBC)  
Experiences:  
■ Led the research team of 17 fellow researchers on a project titled “Ultrasound-Based AI for COVID-19 Detection: A Comprehensive Review of Public and Private Lung Ultrasound Datasets and Studies  
■ Contributed to writing the original manuscript, software implementation, and data curation and served as a corresponding author for the entire communication with the journal  


Research Intern (RI) Oct 2021 - Mar 2022
Okinawa Institute of Science and Technology Graduate University (OIST), Japan Affiliation (Acceptance Rate: 14%)
Research topic: Evolutionary dynamics of strongly conserved sequences in vertebrates and insects Code Repository
Supervisor: Professor Jonathan Miller (BS in Statistics, Yale; PhD in Biology, Cambridge; PhD in Physics, Caltech)  
Experiences:  
■ Awarded with full-funded scholarship with a daily allowance of JPY 2400 per working day (taxable)  
■ Conducted research on perfectly conserved sequence (PCS) length distributions of UCSC 44 pairwise genome sequences  
■ Analyzed quantile kurtosis of PCS lengths proposed by Nash and Lenhard (2018) and identified a ‘knee’ in the PCS distributions of the heavy-tailed region  
■ Collaborated with Dr. Zifcakova to track erroneous out-of-bound PCS coordinates generated by Nash and Lenhard (2018), utilizing R and Bedtool, and resolved issues using Python 3.10  
■ Optimized Nash and Lenhard’s 3 R scripts for PCS generation, quantile kurtosis analysis, and genomic regulatory blocks (GRBs), reducing time and memory complexity. Successfully reproduced PCS coordinates following UCSC format and fixed genome coordinate related errors in R’s Bioconductor package  
■ Demonstrated proficiency in shell scripting, parallel computing, and software installation on the HPC Deigo cluster  
■ Presented weekly progress to the Unit using MS PowerPoint slides and animations  


Research Intern May 2021
UiT - The Arctic University of Norway Internship Report
Supervisors: Ghada Bouzidi, Prof. Aleksander Pedersen, Prof. Rune Dalmo  
Duties included: Code Repository
■ Conducted comprehensive data and statistical analysis on the Narvik road dataset as part of the DIT4BEARs Smart Road project  
■ Designed, implemented, and evaluated ML models (classifiers: KNN, Logistic Regression, XGBoost, Prophet) that identified the road state as one of the following states: dry, moist, wet, icy, snowy, slushy) to tackle the winter weather challenges encountered in the Barren Euro-Arctic region  
■ Proposed a novel safety metric and forecasted its values using ML regressors: Ridge, Lasso, Elastic Net, Linear Regression, XGBRegressor  
■ Effectively communicated project findings by presenting results at the final meeting, attended by 4 distinguished professors  


Grants & Funding

Competitive Research Funding in AI


Peer Review Experiences

Reviewed a total of 16 journal articles verified by Web of Science, as of December 2024 (Web of Science ResearcherID: AFE-0313-2022).


Leadership and Advisory Roles

KUET Research Society Nov 2023 - May 2024
Co-founder & President LinkedIn Page
Co-moderator: Dr. Md. Saiful Islam  
Responsibilities:  
■ Served as an Executive Committee Member and President of the Industrial Engineering and Management Research Unit  
■ Supervising (as an alumnus) 6 groups of research students concentrating on ML-DL and computational fuzzy logic, fostering cross-departmental research collaboration  
■ Teaching (as an alumnus) scientific research methodology, research ethics, and journal article formatting meeting publication criteria and acquiring funding for publications  


SpecX Aug 2022 - Present
Founder & AI Researcher MIT Solve 2024
■ Developed a hybrid DL model architecture, integrated XAI, topic modeling, telemedicine appointment, and personalized treatment  
■ Acquired funding from the University of Aizu (Japan) and AIUB (Bangladesh) to collect patients’ data and conduct NLP research